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cookiecutter-scverse-instance

  • API
    • cookiecutter_scverse_instance.pp.basic_preproc
    • cookiecutter_scverse_instance.pp.elaborate_example
    • cookiecutter_scverse_instance.tl.basic_tool
    • cookiecutter_scverse_instance.pl.basic_plot
    • cookiecutter_scverse_instance.pl.BasicClass
  • Changelog
  • Using this template
  • Contributing guide
  • References
  • Example notebook
  • .md

API

Contents

  • Preprocessing
  • Tools
  • Plotting

API#

Preprocessing#

pp.basic_preproc(adata)

Run a basic preprocessing on the AnnData object.

pp.elaborate_example(items, transform, *[, ...])

A method with a more complex docstring.

Tools#

tl.basic_tool(adata)

Run a tool on the AnnData object.

Plotting#

pl.basic_plot(adata)

Generate a basic plot for an AnnData object.

pl.BasicClass(adata)

A basic class.

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Contents
  • Preprocessing
  • Tools
  • Plotting

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